MenstrualCycleBrainDynamics

This repository provides a MATLAB implementation of a whole-brain node-metastability (ignition) analysis framework, developed to examine the effects of menstrual cycle phase, hormone levels, and age on dynamical brain activity in healthy women. The pipeline processes resting-state fMRI and structural connectivity data to compute subject-specific ignition metrics, allowing quantification of functional reactivity and complexity across cortical networks such as DMN, salience, and somatomotor systems. This tool enables individualised whole-brain modelling relevant for neuroendocrinology and women's brain health research. For methodology, data structure, and usage instructions, see the full README file: README.md (https://github.com/decolab/menstrualcycle_ignition/blob/main/README.md)

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