Publications

Please find a list of selected publications related to EBRAINS below. To view publications associated with a specific programmes, please filter by project.

Research article

Brain sodium MRI-derived priors support the estimation of epileptogenic zones using personalized model-based methods in epilepsy

Azilinon, M., Wang, H. E., Makhalova, J., Zaaraoui, W., Ranjeva, J.-P., Bartolomei, F., Guye, M. and Jirsa, V. (2024). Network Neuroscience 8, 3: 673–696.
Research article

The morphospace of the brain-cognition organisation

Pacella, V., Nozais, V., Talozzi, L., Abdallah, M., Wassermann, D., Forkel, S. J. and Thiebaut de Schotten, M. (2024). Nature Communications 15, 1: 8452.
Research article

Digital tools of analysis and data integration facilitate synergy between mouse and human brain research and enable translation

Hölter, S. M., Garrett, L., Bludau, S. and Amunts, K. (2024). Mammalian Genome 35, 4: 544–550.
Research article

Comparison of basal ganglia regions across murine brain atlases using metadata models and the Waxholm Space

Kleven, H., Schlegel, U., Groenewegen, H. J., Leergaard, T. B. and Bjerke, I. E. (2024). Scientific Data 11, 1: 1036.
Book chapter

Human brain anatomy and atlases

Amunts, K. and Zachlod, D. (2025). In Encyclopedia of the Human Brain (Second Edition). Elsevier.
Research article

Inference on the Macroscopic Dynamics of Spiking Neurons

Baldy, N., Breyton, M., Woodman, M. M., Jirsa, V. K. and Hashemi, M. (2024). Neural Computation 36, 10: 2030–2072.
Preprint

Quantitative cytoarchitectural phenotyping of deparaffinized human brain tissues

Meo, D. D., Sorelli, M., Ramazzotti, J., Cheli, F., Bradley, S., Perego, L., Lorenzon, B., Mazzamuto, G., Emmi, A., Porzionato, A., Caro, R. D., Garbelli, R., Biancheri, D., Pelorosso, C., Conti, V., Guerrini, R., Pavone, F. S. and Costantini, I. (2024). bioRxiv: 2024.2009.2010.612232.
Conference proceedings

3D reconstruction of BigBrain2: Progress report on semi-automated repairs of histological sections

Lepage, C., Mohlberg, H., Lewis, L. B., Toussaint, P. J., Wenzel, S., Evans, A. C. and Amunts, K. (2024). 8th BigBrain Workshop, Heinrich-Heine-University Düsseldorf Padua, Italy: 2024/09/09–2024/09/11.
Research article

A layered microcircuit model of somatosensory cortex with three interneuron types and cell-type-specific short-term plasticity

Jiang, H.-J., Qi, G., Duarte, R., Feldmeyer, D. and van Albada, S. J. (2024). Cerebral Cortex 34, 9.
Research article

Identifying sources of bias when testing three available algorithms for quantifying white matter lesions: BIANCA, LPA and LGA

Miller, T., Bittner, N., Moebus, S. and Caspers, S. (2025). GeroScience 47, 1: 1221–1237.
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