The Workflows and Use Cases are implemented via web applications or Python based jupyter notebooks running on the EBRAINS jupyterlab platform. They allow to go through selected procedures related to a wide range of computational neuroscience applications; these includes: 1) extracting features from electrophysiological recordings or simulated neural activity; 2) building single cell hippocampal detailed NEURON models based on experimental data; 3) analyzing and visualizing reconstructed neural morphologies; 4) running in silico experiments on small circuits (built by the users from a reconstructed volume) and entire brain regions.
Depending on the Use Cases and Workflows, job submission to dedicated HPC systems might be required. Users can get access through their own credentials or through the service account utility, which we have specifically developed to lower access barrier for users less experienced in computational issues.
Most workflows require a free EBRAINS account.